BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C04SP1|AL428350
(917 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1406 1804 0.0
>3x_Contig1406
Length = 8172
Score = 1804 bits (910), Expect = 0.0
Identities = 917/918 (99%), Gaps = 1/918 (0%)
Strand = Plus / Plus
Query: 1 aagccattgatcattgttatgcatggtttggctggtggtagccatgaaccaatcatcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2056 aagccattgatcattgttatgcatggtttggctggtggtagccatgaaccaatcatcaga 2115
Query: 61 tcattaacggagcaactttcaaatatctctaatgagaagtttaaagtggccgtgttgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2116 tcattaacggagcaactttcaaatatctctaatgagaagtttaaagtggccgtgttgaac 2175
Query: 121 accagaggttgtgcacgtacaaaagttgtatcaccgaaattgttctatgcgtttgcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2176 accagaggttgtgcacgtacaaaagttgtatcaccgaaattgttctatgcgtttgcaaca 2235
Query: 181 gaagatctgcgtgagtttgtgcaaagagaacacaagcgtgatccaaagagaaagatttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2236 gaagatctgcgtgagtttgtgcaaagagaacacaagcgtgatccaaagagaaagatttat 2295
Query: 241 gctgttgggttttcattcggtgcaacaatgttggctaatttcctgggagaagaaggagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2296 gctgttgggttttcattcggtgcaacaatgttggctaatttcctgggagaagaaggagaa 2355
Query: 301 aagtgtcttttatcaggtgctgcattagtatgtaatccttgggacttgactaattctgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2356 aagtgtcttttatcaggtgctgcattagtatgtaatccttgggacttgactaattctgcc 2415
Query: 361 cataaaatgagggaagacttctggtctagtcgtttgttcgcaaagagtatcactcaattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2416 cataaaatgagggaagacttctggtctagtcgtttgttcgcaaagagtatcactcaattt 2475
Query: 421 ttagtaagaacactggaagttaacatgaatcaaatcgaatggaagggcggtgagaagcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2476 ttagtaagaacactggaagttaacatgaatcaaatcgaatggaagggcggtgagaagcct 2535
Query: 481 gctgagatttcgccagaacactattcgaattattctttcacacgtgaaaacttgaaaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2536 gctgagatttcgccagaacactattcgaattattctttcacacgtgaaaacttgaaaaaa 2595
Query: 541 gctaagcagttcactgatccaagtcagtttgatgacatttttacagcaaaggctgttgga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2596 gctaagcagttcactgatccaagtcagtttgatgacatttttacagcaaaggctgttgga 2655
Query: 601 ttcgaagactcctggtcttattaccgtgtcggaagctctattaaccgtctaccaactata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2656 ttcgaagactcctggtcttattaccgtgtcggaagctctattaaccgtctaccaactata 2715
Query: 661 aatgttccaactctagtcatcaattccaaagatgacccagtcataggtgataaatgtatt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2716 aatgttccaactctagtcatcaattccaaagatgacccagtcataggtgataaatgtatt 2775
Query: 721 ccagtgaaggaagctgaggaaaatcctcatgttttactgatcgaaacagatttaggtggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2776 ccagtgaaggaagctgaggaaaatcctcatgttttactgatcgaaacagatttaggtggc 2835
Query: 781 catttagcttacttggag-aaaaccatgactcttgggcaacaaagcaggttgcccaatat 839
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 2836 catttagcttacttggagaaaaaccatgactcttgggcaacaaagcaggttgcccaatat 2895
Query: 840 tttgatgctcttgaatcattagtcaaataaagtaatgtcaatgtttaaaacatttgtaca 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2896 tttgatgctcttgaatcattagtcaaataaagtaatgtcaatgtttaaaacatttgtaca 2955
Query: 900 caagatactattcatata 917
||||||||||||||||||
Sbjct: 2956 caagatactattcatata 2973
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6543
Number of Sequences: 1807
Number of extensions: 6543
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 917
length of database: 10,358,551
effective HSP length: 16
effective length of query: 901
effective length of database: 10,329,639
effective search space: 9307004739
effective search space used: 9307004739
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)